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MicroVigene™
version 3.0 |
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Software
Capabilities & Main Features |
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MicroVigeneTM
ver 3.0
includes many
features and functions that will facilitate you to
analyze your DNA/ RNA, protein/antibody and other type
of microarray images. |
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One time tuning and
one mouse click |
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Automatically find
blocks, align flex-grid, and locate spot, remove
dust, and correct background. |
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Support batch process |
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User Friendly interface |
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Support
any type of grid layout up to four levels of hierarchies
via configurable objects |
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3D
on screen visualization to check spot accuracy |
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Display
scatter plot to view the correlation between images. |
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View the fold change or spot info in grid. By clicking
a row in the grid, the corresponding spot in
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the
image
will be highlighted, and visa verse. |
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Output over 20 spot
measurements at your choice in Text, Excel, or XML. |
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Save grid and spots
in binary and vector format |
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Support plug-ins to
allow you extend the functionalities tailored to
your own needs. |
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Import plate map file
to associate gene IDs with individual spots. |
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Automatically combine
two channel images to one color composite image |
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Automatically overlay
saved grid spots on top of the image. |
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Automatic image
contrast enhancement |
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Zoom in, out, and
into a selected region. You can also use the
magnifier to zoom a small region. |
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Print preview and
batch print |
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Histogram display for
a selected region |
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Full
support for 8- or 16-bit TIFF, .GEL and Fuji's
images. |
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Save selected region
of image to Tiff format |
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Stitch multiple image (new) |
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Control spot quantification
with thresholds in spot intensity and shape |
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Grid and
Spots Quality |
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MicroVigeneTM
can automatically
place flexible grid and perform
accurate signal background
segmentation. The benefits
of accurate segmentation are: High
accuracy ,High sensitivity,100%
data reproducibility.
The following screen capture
illustrates how well MicroVigeneTM
can find the actual spot
boundary with flexible grid.
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2D vs. 3D
Visualization |
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It is hard
to tell if the spots was find correctly
from the image and spot overlay . |
It is much
clearer when view from 3D visualization
tool. |
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